access sim_results.summary() for further analysis in R

theislab / scCODA

A Bayesian model for compositional single-cell data analysis

BSD 3-Clause "New" or "Revised" License

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access sim_results.summary() for further analysis in R #71

Closed dwendisch closed 1 year ago

dwendisch commented 1 year ago

Hi! My Python knowledge is very superficial. I managed to create sim_results.summary() of my analysis. Now I would like to continue my analysis in R. However I don't quite know how to deal with a type <class 'sccoda.util.result_classes.CAResult'>.

Could you help me with how I could store the results in a tabular format in a .csv that I can read into my R environment?

All the best and thank you!

dwendisch commented 1 year ago

I found the answer here. https://github.com/theislab/scCODA/issues/51

johannesostner commented 1 year ago

Thanks for using scCODA! Since you found your answer, I'll close this issue