Replace sklearn dependency with scikit-learn

theislab / scCODA

A Bayesian model for compositional single-cell data analysis

BSD 3-Clause "New" or "Revised" License

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Replace sklearn dependency with scikit-learn #73

Closed radutanasa closed 1 year ago

radutanasa commented 1 year ago

The sklearn dependency has been deprecated. Currently, the installation of scCODA fails unless the variable SKLEARN_ALLOW_DEPRECATED_SKLEARN_PACKAGE_INSTALL is set to true.

See more here: https://github.com/scikit-learn/sklearn-pypi-package

johannesostner commented 1 year ago

Hi @radutanasa, thanks for spotting this. I removed sklearn from the dependencies list, as it is not required for scCODA anymore (simply forgot to remove it from the dependencies list).