Hi I'm trying to run your tutorial of mapping data to HLCA and I'm getting an error while loading the reference model
surgery_model = sca.models.SCANVI.load_query_data(
adata_query,
ref_model_dir,
freeze_dropout=True,
)
INFO File /Users/bapoorva/Desktop/HLCA/HLCA_reference_model/model.pt already downloaded
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/Users/bapoorva/miniconda3/lib/python3.11/site-packages/scvi/model/base/_archesmixin.py", line 89, in load_query_data
attr_dict, var_names, load_state_dict = _get_loaded_data(
^^^^^^^^^^^^^^^^^
File "/Users/bapoorva/miniconda3/lib/python3.11/site-packages/scvi/model/base/_archesmixin.py", line 330, in _get_loaded_data
attr_dict, var_names, load_state_dict, _ = _load_saved_files(
^^^^^^^^^^^^^^^^^^
File "/Users/bapoorva/miniconda3/lib/python3.11/site-packages/scvi/model/base/_utils.py", line 69, in _load_saved_files
model = torch.load(model_path, map_location=map_location)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/Users/bapoorva/miniconda3/lib/python3.11/site-packages/torch/serialization.py", line 809, in load
return _load(opened_zipfile, map_location, pickle_module, **pickle_load_args)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/Users/bapoorva/miniconda3/lib/python3.11/site-packages/torch/serialization.py", line 1172, in _load
result = unpickler.load()
^^^^^^^^^^^^^^^^
File "/Users/bapoorva/miniconda3/lib/python3.11/pickle.py", line 1213, in load
dispatch[key[0]](self)
File "/Users/bapoorva/miniconda3/lib/python3.11/pickle.py", line 1254, in load_binpersid
self.append(self.persistent_load(pid))
^^^^^^^^^^^^^^^^^^^^^^^^^
File "/Users/bapoorva/miniconda3/lib/python3.11/site-packages/torch/serialization.py", line 1142, in persistent_load
typed_storage = load_tensor(dtype, nbytes, key, _maybe_decode_ascii(location))
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/Users/bapoorva/miniconda3/lib/python3.11/site-packages/torch/serialization.py", line 1116, in load_tensor
wrap_storage=restore_location(storage, location),
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/Users/bapoorva/miniconda3/lib/python3.11/site-packages/torch/serialization.py", line 1086, in restore_location
return default_restore_location(storage, str(map_location))
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/Users/bapoorva/miniconda3/lib/python3.11/site-packages/torch/serialization.py", line 220, in default_restore_location
raise RuntimeError("don't know how to restore data location of "
RuntimeError: don't know how to restore data location of torch.storage.UntypedStorage (tagged with mps:0)
Any ideas on what might be causing the error and how to fix it ?
Hi I'm trying to run your tutorial of mapping data to HLCA and I'm getting an error while loading the reference model
Any ideas on what might be causing the error and how to fix it ?