Fix issue #224 / Improve handling of unlabled cells

theislab / scarches

Reference mapping for single-cell genomics

https://docs.scarches.org/en/latest/

BSD 3-Clause "New" or "Revised" License

331 stars 51 forks source link

Fix issue #224 / Improve handling of unlabled cells #232

Open moinfar opened 6 months ago

moinfar commented 6 months ago

This PR solves #224. In scPoli, labeled_indices should be passed if all labels are not available. In this PR we infer it from unknown_ct_names parameter. In addition, a minor bug is fixed.