Open bitcometz opened 3 years ago
hello,
I want to do the analysis in order to reproduce paper according to this notebook: https://nbviewer.jupyter.org/github/M0hammadL/scGen_reproducibility/blob/master/Jupyter%20Notebooks/Fig2.ipynb
pbmc = sc.read("../data/train_pbmc.h5ad")
But I cannot find the train_pbmc.h5ad file. Could you help with this problem ?
train_pbmc.h5ad
Thanks!!!
Hi,
there is a data downloader script. Did you run that already?
https://github.com/theislab/scgen-reproducibility/blob/master/code/DataDownloader.py
hello,
I want to do the analysis in order to reproduce paper according to this notebook: https://nbviewer.jupyter.org/github/M0hammadL/scGen_reproducibility/blob/master/Jupyter%20Notebooks/Fig2.ipynb
But I cannot find the
train_pbmc.h5ad
file. Could you help with this problem ?Thanks!!!