Closed levinhein closed 3 years ago
I don't know if this might help or if it affected this "pred, delta" part. But during the Prediction part, there was a FutureWarning prompt.
SCRIPT:
NR_CD4T = train[((train.obs["celltype"] == "Exhausted CD4 T Cells") & (train.obs["response"] == "NR"))]
PROMPT:
/home/levinbioinformatics/anaconda3/envs/scgen_test/lib/python3.7/site-packages/anndata/_core/anndata.py:1094: FutureWarning: is_categorical is deprecated and will be removed in a future version. Use is_categorical_dtype instead
if not is_categorical(df_full[k]):
SCREENSHOT:
Hello. May I ask if you have any idea about this? Thank you!
Hi
We have released a new PyTorch version of the code. Please use this version.
Best Mo
Hello. I encountered an error as shown below. May I ask if this error mean that I cannot run an h5ad data if the condition in my actual data is not categorized as "condition"? My experiment condition label on data is "response", and not "condition". Or this error means different?
SCRIPT:
ERROR: