Test all functionality in tests

theislab / scgen

Single cell perturbation prediction

https://scgen.readthedocs.io

GNU General Public License v3.0

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Closed adamgayoso closed 3 years ago

Cottoneyejoe95 commented 3 years ago

Both notebooks run as intended. @M0hammadL is there any other functionality to test?

M0hammadL commented 3 years ago

not that I think of

adamgayoso commented 3 years ago

I meant to say we should add all functionality in the tests .py file so it runs with CI.

M0hammadL commented 3 years ago

@Cottoneyejoe95 then we need to add test functions for train, predict and batch removal functionalities

Cottoneyejoe95 commented 3 years ago

I added the functions batch_removal, predict and reg_mean_plot into the test script