theislab / scgen

Single cell perturbation prediction
https://scgen.readthedocs.io
GNU General Public License v3.0
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Errors while reading salmonella h5ad files #70

Open bitcometz opened 2 years ago

bitcometz commented 2 years ago

hello,

while I am redoing the scgen-reproducibility notebooks Fig 3, I met some errors:

image

lQLPDhtmjDc3O81XzQT-sBbyt7TUqiwAAniv96vAAgA_1278_87

image

Could you help with this problem ?

Best

znavidi commented 8 months ago

I have been facing the same error for a while and was wondering if there is any solution for loading this data properly?

Best