theislab / scgen

Single cell perturbation prediction
https://scgen.readthedocs.io
GNU General Public License v3.0
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difference between SCGEN and SCGENVAE #89

Open huawen-poppy opened 9 months ago

huawen-poppy commented 9 months ago

Hello! Thanks for your nice tool!

Could you please tell me the difference between scgen.SCGEN and scgen.SCGENVAE? I am now following the tutorial to train a model for perturbation prediction (https://scgen.readthedocs.io/en/stable/tutorials/scgen_perturbation_prediction.html). After saving the trained model, how could I load the model properly? Should I use scgen.SCGEN.load(path_to_model) or scgen.SCGENVAE.load(path_to_model)?

Thank you in advance for your help.

Best, Huawen