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theislab / scib

Benchmarking analysis of data integration tools
MIT License
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No such file or directory: '/tmp/lisi_gtjq4lmu/graph_lisi_indices_0.txt' #386

Closed BillyChen123 closed 8 months ago

BillyChen123 commented 1 year ago

When I run this code, I have some trouble. '''scib.me.clisi_graph(datasets, label_key="batch2", type="full")'''

FileNotFoundError: [Errno 2] No such file or directory: '/tmp/lisi_gtjq4lmu/graph_lisi_indices_0.txt'

How do I fix it?

johnarevalo commented 1 year ago

Try installing from source, as suggested in https://github.com/theislab/scib/issues/308

mumichae commented 8 months ago

Closing this for now. Feel free to reopen if this is still an issue