theislab / scib

Benchmarking analysis of data integration tools
MIT License
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export the benchmarking table resuls as pdf #416

Open mohamednhassan opened 1 month ago

mohamednhassan commented 1 month ago

I have used the following code as in the guidelines

bm = Benchmarker( adata, batch_key= "samples", label_key= "annotation", embedding_obsm_keys=["X_raw_pca", "X_harmony", "X_scvi_emb", "X_bbknn_pca"], n_jobs=6)

bm.benchmark()

bm.plot_results_table()

the produced table is plottable.table.Table data structure.

How can I export this produced table as a pdf with high quality?