Donor deconvolution

[Zethson]

Donor inference

• Vireo
• Souporcell
• scsplit
• Genetic demultiplexing of pooled single-cell RNA-sequencing samples in cancer facilitates effective experimental design + code: https://github.com/lmweber/snp-dmx-cancer
• Can mention demuxlet, but it requires additional information

Dataset: Maybe the Souporcell test dataset mentioned in their README? Would restrict our notebook to Souporcell because Souporcell has a different input than e.g. Vireo.

[Zethson]

@AnnaChristina @danielStrobl does it make sense to add this as an advanced topic for preprocessing? This is the stage where you would apply such stuff. We would however introduce VC likely later. But since it's an advanced topic?