search

theislab / tcellmatch

BSD 3-Clause "New" or "Revised" License
37 stars 7 forks source link

10x dataset covariates #2

Open cirdeCyL opened 2 years ago

cirdeCyL commented 2 years ago

Hi,

in your tutorial notebook, you use fns_covar = ["vdj_v1_hs_aggregated_donor1_binarized_matrix_extended_covariates.csv", "vdj_v1_hs_aggregated_donor2_binarized_matrix_extended_covariates.csv"]. My question is, where I can get this data from 10xgenomics. I looked up here: https://www.10xgenomics.com/resources/datasets/cd-8-plus-t-cells-of-healthy-donor-1-1-standard-3-0-2 and found all the relevant data except for the covariates.

kind regards, Cedric

CharlesShen-bot commented 2 years ago

hi, I am also having the same above question.