Currently AnnData2SCE() stores data in the AnnData varm slot as a column of rowData but nothing is done with this in the reverse direction by SCE2AnnData(). It should be possible to get this back into varm but it might require storing it in a special column in metadata rather than in rowData.
Currently
AnnData2SCE()stores data in the AnnDatavarmslot as a column ofrowDatabut nothing is done with this in the reverse direction bySCE2AnnData(). It should be possible to get this back intovarmbut it might require storing it in a special column inmetadatarather than inrowData.