Adapt makeLinkedTxome to Salmon 1.0.0 index

thelovelab / tximeta

Transcript quantification import with automatic metadata detection

https://thelovelab.github.io/tximeta/

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Closed csoneson closed 4 years ago

csoneson commented 4 years ago

makeLinkedTxome would fail for indexes generated with Salmon 1.0.0, since the info.json file doesn't have a "value0" sublevel anymore.

mikelove commented 4 years ago

Thanks! will push to release today