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thelovelab / tximeta

Transcript quantification import with automatic metadata detection
https://thelovelab.github.io/tximeta/
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Error in splitSE #36

Closed cnk113 closed 4 years ago

cnk113 commented 4 years ago

Hello,

I accidentally updated some packages along with tximeta, and when I run splitSE to split the counts into spliced and unspliced counts I get the error. txis <- splitSE(txi, cg, assayName = "counts") Where cg has two columns, spliced and unspliced. Error in (function (x) : attempt to apply non-function I'm assuming the error is rather recent since this was after I accidentally updated it. For reference I'm following the alevin velocity tutorial.

Thanks, Chang

mikelove commented 4 years ago

Could you post to support.bioconductor.org with sessionInfo() and we’ll look into it.