Small differences in derived txomes relative to reference txome (possible?)

thelovelab / tximeta

Transcript quantification import with automatic metadata detection

https://thelovelab.github.io/tximeta/

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Small differences in derived txomes relative to reference txome (possible?) #5

Open ttriche opened 6 years ago

ttriche commented 6 years ago

Not sure if this is possible/practical at scale but it would seem that if you know the differences between transcriptome versions (i.e. minimum sequence needed to test for say ENS92 vs ENS93) then one could set up a relatively quick method of matching arbitrary derived transcriptomes.

mikelove commented 6 years ago

Thanks @ttriche and we’ll make sure to check out Arkas