thibautjombart / adegenet

adegenet: a R package for the multivariate analysis of genetic markers
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Connection network not displaying connections when plotting results of sPCA #321

Open z-j-r opened 2 years ago

z-j-r commented 2 years ago

Hello,

I have successfully managed to run an spca but am having issues when I attempt to plot the results. All 6 displays are visible (connection network, the three score 1 visualizations, Eigenvalues, and Eigenvalues decomposition), but the connection network does not display the lines connecting the points. When creating the connection network with chooseCN, the lines are correctly displayed. Is there any way to get the output to correctly display the connection network? Thanks! Rplot14