I am trying to estimate heterozygosity (and relative p values) per locus across all individuals within a population using SNP data. I have used the summary() function but that would not provide p values, also I have noticed that the estimates for He are different from those that I have obtained using STRAF, which as far as I understand exploits the NEI's algorithm. Any idea?
Many thanks.
Hello,
I am trying to estimate heterozygosity (and relative p values) per locus across all individuals within a population using SNP data. I have used the summary() function but that would not provide p values, also I have noticed that the estimates for He are different from those that I have obtained using STRAF, which as far as I understand exploits the NEI's algorithm. Any idea? Many thanks.