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thibautjombart / adegenet

adegenet: a R package for the multivariate analysis of genetic markers
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CRAN Errors 2022-09 #337

Closed zkamvar closed 1 year ago

zkamvar commented 1 year ago

Dear maintainer,

Please see the problems shown on https://cran.r-project.org/web/checks/check_results_adegenet.html.

Please correct before 2022-10-09 to safely retain your package on CRAN.

The CRAN Team

The errors:

Version: 2.1.7
Check: Rd files
Result: NOTE
    checkRd: (-1) HWE.Rd:22: Escaped LaTeX specials: \$
    checkRd: (-1) accessors.Rd:79: Escaped LaTeX specials: \$ \$
    checkRd: (-1) dist.genpop.Rd:91: Escaped LaTeX specials: \~
    checkRd: (-1) genind.Rd:20: Escaped LaTeX specials: \$
    checkRd: (-1) genpop.Rd:20: Escaped LaTeX specials: \$
    checkRd: (-1) hybridize.Rd:39: Escaped LaTeX specials: \_
    checkRd: (-1) selpopsize.Rd:20: Escaped LaTeX specials: \$
    checkRd: (-1) seploc.Rd:47: Escaped LaTeX specials: \$
    checkRd: (-1) spca.Rd:113: Escaped LaTeX specials: \$ \$
    checkRd: (-1) truenames.Rd:28: Escaped LaTeX specials: \$ \$
    checkRd: (-1) truenames.Rd:31: Escaped LaTeX specials: \$ \$
    checkRd: (-1) truenames.Rd:32: Escaped LaTeX specials: \$
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64

Version: 2.1.7
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     adesub.c:44:11: warning: invalid UTF-8 in comment [-Winvalid-utf8]
     adesub.c:44:24: warning: invalid UTF-8 in comment [-Winvalid-utf8]
     adesub.c:159:38: warning: invalid UTF-8 in comment [-Winvalid-utf8]
     adesub.c:180:30: warning: invalid UTF-8 in comment [-Winvalid-utf8]
     adesub.c:180:32: warning: invalid UTF-8 in comment [-Winvalid-utf8]
     adesub.c:181:38: warning: invalid UTF-8 in comment [-Winvalid-utf8]
     adesub.c:469:35: warning: invalid UTF-8 in comment [-Winvalid-utf8]
     adesub.c:471:17: warning: invalid UTF-8 in comment [-Winvalid-utf8]
     adesub.c:471:29: warning: invalid UTF-8 in comment [-Winvalid-utf8]
     adesub.c:780:29: warning: invalid UTF-8 in comment [-Winvalid-utf8]
     adesub.c:781:46: warning: invalid UTF-8 in comment [-Winvalid-utf8]
     adesub.c:919:30: warning: invalid UTF-8 in comment [-Winvalid-utf8]
     adesub.c:1132:29: warning: invalid UTF-8 in comment [-Winvalid-utf8]
     adesub.c:1133:48: warning: invalid UTF-8 in comment [-Winvalid-utf8]
     snpbin.c:539:29: warning: 'sizeof (a)' will return the size of the pointer, not the array itself [-Wsizeof-pointer-div]
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 2.1.7
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     snpbin.c:539:29: warning: division ‘sizeof (double *) / sizeof (double)’ does not compute the number of array elements [-Wsizeof-pointer-div]
Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 2.1.7
Check: installed package size
Result: NOTE
     installed size is 5.8Mb
     sub-directories of 1Mb or more:
     R 2.0Mb
     data 1.3Mb
     files 1.7Mb
Flavors: r-release-macos-arm64, r-oldrel-macos-arm64