Division and collaboration

thkuo / seq2geno

Computational pipeline for genomic features of bacterial population

GNU General Public License v3.0

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Division and collaboration #51

Closed thkuo closed 3 years ago

thkuo commented 5 years ago

Two main questions to solve:

How are the jobs divided?
Who can guide the changes into whom at what scale? (Who lead the evolution?)

thkuo commented 5 years ago

Separation of executive script (ie. the main script) and the libraries/tools (ie. the external scripts linked to a smk rule) may result in conflicts

thkuo commented 5 years ago

The input of each rule cannot be null value, and the relevant workflow shouldn't be turned on when it's not specified. Therefore, the finally files should have default name, but they are optionally included in the rule all: