thkuo / seq2geno

Computational pipeline for genomic features of bacterial population
GNU General Public License v3.0
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version control of prokka #56

Open thkuo opened 5 years ago

thkuo commented 5 years ago

Prokka requires tbl2asn, which expires every six months (https://github.com/tseemann/prokka/issues/323). Therefore, it is impossible to keep the version of prokka.

Solution 1: not specify the software version in the conda env file (yaml) Solution 2: regularly release an update of sg (and sgp)