the test data "soybean.hapmap" was faild

thlee / SNPhylo

A pipeline to generate a phylogenetic tree from huge SNP data

http://chibba.pgml.uga.edu/snphylo/

GNU General Public License v2.0

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the test data "soybean.hapmap" was faild #20

Open moko-moko opened 7 years ago

moko-moko commented 7 years ago

$ /home/username/snphylo/SNPhylo/snphylo.sh -H soybean.hapmap Start to remove low quality data. File "/home/username/snphylo/SNPhylo/scripts/remove_no_genotype_data.py", line 6 print "Remove SNP data which have many samples which have no SNP information" ^ SyntaxError: Missing parentheses in call to 'print'

What happened?

moko-moko commented 7 years ago

I use python2 instead of python3 to set up "bash setup.sh" again.

The detected path of python is /home/username/anaconda3/bin/python. Is it correct? [Y/n] n python is not found. Is the program already installed? [y/N] y Please enter the path of python program (ex: /home/foo/bin/python): /usr/bin/python2

the example was succeeded.