'Function not found' error for neighborhoodSplit()

thomasp85 / FindMyFriends

Fast alignment-free pangenome creation and exploration

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'Function not found' error for neighborhoodSplit() #6

Closed ivagljiva closed 8 years ago

ivagljiva commented 8 years ago

I am going through the vignette tutorial and obtaining the following error when I try to run the refinement step: Error in (function (classes, fdef, mtable) : unable to find an inherited method for function ‘neighborhoodSplit’ for signature ‘"pgFull"’

As far as I know, I have current versions of the general Bioconductor packages and the FindMyFriends package.

Any insight on this error would be appreciated.

thomasp85 commented 8 years ago

neighborhoodSplit is only available for pgLoc subclasses as it needs chromosomal location information to work...