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thomasp85 / MSGFgui

A gui overlay and extension for MSGFplus
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Can't upload file #35

Open shaojunyu opened 5 years ago

shaojunyu commented 5 years ago

Hi Thomas, When I am trying to upload some mzMl file through MSGF web, the select dialog is empty and I can't upload any files. Same issue with fasta files.

image

vnijs commented 5 years ago

What version of shinyFiles are you using? The latest is 0.7.2

packageVersion('shinyFiles')

shaojunyu commented 5 years ago

image It's the latest version 0.7.2.

yuzhuxuyang commented 5 years ago

I have the same issue, please tell us how to solve it. Thanks!

vnijs commented 5 years ago

MSGFgui might work with a previous version of shinyFiles. Try the code below, restart R(studio), and try again.

install.packages("remotes")
remotes::install_version("shinyFiles", version = "0.6.2", upgrade = FALSE)
yuzhuxuyang commented 5 years ago

That works! Thanks so much!

yuzhuxuyang commented 5 years ago

Hi

Sorry to bother you again, after solving this question, then I have another issue, which is the #32 '' reading GM18486_MSB15024_01B.mzid... DONE! Warning: Error in scans: could not find function "scans" 60: 45: 2: runApp 1: MSGFgui '' Could you tell me how to figure it out? Many thanks!

vnijs commented 5 years ago

Sorry but no. I contribute to the shinyFiles package that this issue was about but not to MSGFgui. @thomasp85 is the author of MSGFgui

EdenGoldfarb commented 5 years ago

Hi

Sorry to bother you again, after solving this question, then I have another issue, which is the #32 '' reading GM18486_MSB15024_01B.mzid... DONE! Warning: Error in scans: could not find function "scans" 60: 45: 2: runApp 1: MSGFgui '' Could you tell me how to figure it out? Many thanks!

same issue here

EdenGoldfarb commented 5 years ago

Try to load mzID package. worked for me.

wangm23456 commented 3 years ago

Waste time