Installation issue

[lepennec]

Dear Thomas,

when I try to install the latest CRAN version, the installation stops at the testing step as shown below. I'm using the latest fedora and I have try both "terminal" R 3.4.1 and rstudio. How can I help?

Erwan

R version 3.4.1 (2017-06-30) -- "Single Candle"
Copyright (C) 2017 The R Foundation for Statistical Computing
Platform: x86_64-redhat-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

Natural language support but running in an English locale

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> install.packages("fiery")
Installing package into ‘/home/lepennec/R/x86_64-redhat-linux-gnu-library/3.4’
(as ‘lib’ is unspecified)
--- Please select a CRAN mirror for use in this session ---
trying URL 'https://ftp.gwdg.de/pub/misc/cran/src/contrib/fiery_1.0.0.tar.gz'
Content type 'application/octet-stream' length 45562 bytes (44 KB)
==================================================
downloaded 44 KB

* installing *source* package ‘fiery’ ...
** package ‘fiery’ successfully unpacked and MD5 sums checked
** R
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package ‘fiery’
    finding HTML links ... done
    Fire                                    html  
    event_doc                               html  
    fake_request                            html  
    fiery-package                           html  
    plugin_doc                              html  
Rd warning: /tmp/Rtmp5rAFdd/R.INSTALL3a4d65823c9a/fiery/man/plugin_doc.Rd:25: missing file link ‘setRefClass’
*** copying figures
** building package indices
** testing if installed package can be loaded

[thomasp85]

Strange. Can I get you to confirm that all dependencies are available?

[lepennec]

All the dependencies are here and the package is functional after I kill the installation process.

[thomasp85]

That is really strange - I have not had any problems with Linux otherwise, but I do not have access to a fedora system so I cannot confirm if this is a local problem on your end - do you have access to other fedora systems?

[lepennec]

I will try to investigate... Another symptom is after I use fiery I cannot quit cleanly R.

[thomasp85]

Can I get a sessionInfo() with fiery loaded?

[lepennec]

> sessionInfo()
R version 3.4.1 (2017-06-30)
Platform: x86_64-redhat-linux-gnu (64-bit)
Running under: Fedora 26 (Workstation Edition)

Matrix products: default
BLAS/LAPACK: /usr/lib64/R/lib/libRblas.so

locale:
 [1] LC_CTYPE=en_GB.UTF-8       LC_NUMERIC=C              
 [3] LC_TIME=en_GB.UTF-8        LC_COLLATE=en_GB.UTF-8    
 [5] LC_MONETARY=en_GB.UTF-8    LC_MESSAGES=en_GB.UTF-8   
 [7] LC_PAPER=en_GB.UTF-8       LC_NAME=C                 
 [9] LC_ADDRESS=C               LC_TELEPHONE=C            
[11] LC_MEASUREMENT=en_GB.UTF-8 LC_IDENTIFICATION=C       

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] fiery_1.0.0

loaded via a namespace (and not attached):
 [1] Rcpp_0.12.12     codetools_0.2-15 brotli_1.0       listenv_0.6.0   
 [5] future_1.6.0     digest_0.6.12    later_0.3.9002   assertthat_0.2.0
 [9] R6_2.2.2         jsonlite_1.5     stringi_1.1.5    uuid_0.1-2      
[13] xml2_1.1.1       webutils_0.6     urltools_1.6.0   reqres_0.2.0    
[17] tools_3.4.1      triebeard_0.3.0  httpuv_1.3.5     parallel_3.4.1  
[21] compiler_3.4.1   globals_0.10.2 

[thomasp85]

I get word from Twitter that others on fedora doesn't have any problems during installation. Have you updated all packages?

[lepennec]

Yes. I will try to find out what's going on on my laptop. Feel free to close this issue.

On Thu, Aug 17, 2017 at 2:17 PM, Thomas Lin Pedersen < notifications@github.com> wrote:

I get word from Twitter that others on fedora doesn't have any problems during installation. Have you updated all packages?

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub https://github.com/thomasp85/fiery/issues/14#issuecomment-323055426, or mute the thread https://github.com/notifications/unsubscribe-auth/AHgR6aSCVzy9s0OH1Onghl_d4am_Nz16ks5sZC9tgaJpZM4O5iyw .

[lepennec]

I've found the culprit: "later". I had a dev version from github reverting to the one from CRAN solves this issue.