conda dependencies

[thomasvangurp]

name: epiGBS
channels:
- bioconda
- r
- defaults
- conda-forge
dependencies:
- bcftools=1.3.1=1
- bwa=0.7.16=pl5.22.0_0
- pear=0.9.6=2
- sambamba=0.6.6=0
- samtools=1.3.1=5
- seqtk=1.2=0
- star=2.5.3a=0
- tabix=0.2.5=0
- vsearch=2.5.0=0
- perl=5.22.0.1=0
- bzip2=1.0.6=3
- certifi=2016.2.28=py27_0
- curl=7.54.1=0
- krb5=1.13.2=0
- libgcc=5.2.0=0
- libssh2=1.8.0=0
- openssl=1.0.2l=0
- pip=9.0.1=py27_1
- python=2.7.13=0
- readline=6.2=2
- setuptools=36.4.0=py27_1
- sqlite=3.13.0=0
- tk=8.5.18=0
- wheel=0.29.0=py27_0
- zlib=1.2.8=3
- pip:
  - biopython==1.68
  - cycler==0.10.0
  - functools32==3.2.3.post2
  - matplotlib==2.0.0
  - matplotlib-venn==0.11.5
  - nested-dict==1.61
  - numpy==1.12.0
  - pyfaidx==0.4.8.1
  - pyparsing==2.2.0
  - pysam==0.10.0
  - python-dateutil==2.6.1
  - python-levenshtein==0.12.0
  - pytz==2017.3
  - pyvcf==0.6.8
  - scipy==0.18.1
  - six==1.11.0
  - subprocess32==3.2.7
  - toolshed==0.4.6