While running RnBeads for our 512 sample RRBS cohort I received the following error:
In nsites(rnb.set) * sample.count : NAs produced by integer overflow
I checked the data import values and it is stated that there were 7222370 sites from 512 samples. Does this mean that the integer overflow is caused by product of 512*7222370? Is this because R can't handle integers bigger than 32bits or is it related to the implementation of RnBeads?
It would be really nice if you can find a way to support such large number of samples & sites.
Hello,
While running RnBeads for our 512 sample RRBS cohort I received the following error:
I checked the data import values and it is stated that there were 7222370 sites from 512 samples. Does this mean that the integer overflow is caused by product of 512*7222370? Is this because R can't handle integers bigger than 32bits or is it related to the implementation of RnBeads?
It would be really nice if you can find a way to support such large number of samples & sites.
Best, Bekir