Line 660 is
if not os.exists(os.path.join(dir_in, seq1_name)):
which does not work, but this does:
if not os.path.exists(os.path.join(dir_in, seq1_name)):
With these changes made, the output for --match1 and --match2 end up with the right filename in the right place.
Hello Thomas,
There appear to be 3 bugs in put_output within demultiplex.py Line 656
Should be
With the a similar change required on line 658.
Line 660 is
if not os.exists(os.path.join(dir_in, seq1_name)):
which does not work, but this does:if not os.path.exists(os.path.join(dir_in, seq1_name)):
With these changes made, the output for --match1 and --match2 end up with the right filename in the right place.
Thanks, Jason