Fix parameter handling in repo_resolver and update logging configuration.

[joschock]

• Fix an issue with parameter handling in repo_resolver that prevented "branch", "shallow", and "reference" parameters from being passed to git clone operations.
• Updated logging configuration to allow better tracing of repo_resolver operations for future debugging of similar issues.

[codecov[bot]]

Codecov Report

All modified and coverable lines are covered by tests :white_check_mark:

Project coverage is 78.48%. Comparing base (bf643b0) to head (9a91ce1). Report is 72 commits behind head on master.

Additional details and impacted files

[](https://app.codecov.io/gh/tianocore/edk2-pytool-extensions/pull/838?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=tianocore) ```diff @@ Coverage Diff @@ ## master #838 +/- ## ========================================== - Coverage 78.75% 78.48% -0.27% ========================================== Files 49 40 -9 Lines 4909 4890 -19 ========================================== - Hits 3866 3838 -28 - Misses 1043 1052 +9 ``` | [Files](https://app.codecov.io/gh/tianocore/edk2-pytool-extensions/pull/838?dropdown=coverage&src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=tianocore) | Coverage Δ | | |---|---|---| | [edk2toolext/edk2\_logging.py](https://app.codecov.io/gh/tianocore/edk2-pytool-extensions/pull/838?src=pr&el=tree&filepath=edk2toolext%2Fedk2_logging.py&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=tianocore#diff-ZWRrMnRvb2xleHQvZWRrMl9sb2dnaW5nLnB5) | `88.46% <100.00%> (-0.07%)` | :arrow_down: | | [edk2toolext/environment/repo\_resolver.py](https://app.codecov.io/gh/tianocore/edk2-pytool-extensions/pull/838?src=pr&el=tree&filepath=edk2toolext%2Fenvironment%2Frepo_resolver.py&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=tianocore#diff-ZWRrMnRvb2xleHQvZW52aXJvbm1lbnQvcmVwb19yZXNvbHZlci5weQ==) | `92.53% <100.00%> (+2.15%)` | :arrow_up: | ... and [47 files with indirect coverage changes](https://app.codecov.io/gh/tianocore/edk2-pytool-extensions/pull/838/indirect-changes?src=pr&el=tree-more&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=tianocore)