any of the `plyranges` "good-first-issue" issues

[mikelove]

See here:

https://github.com/sa-lee/plyranges/issues?q=is%3Aopen+is%3Aissue+label%3Agood-first-issue

[KittJonathan]

Hi ! I could start by working on the plyranges vignette figures

[nahid18]

Can anyone provide a PDF version of this: common-tasks.Rmd? Hopefully I can work on the plyranges cheatsheet.

I tried to do it with knittr but having trouble installing plyranges

[mikelove]

having trouble installing plyranges

Want to make a support.bioconductor.org post and I'll help out? Post your installation error etc.

[nahid18]

@mikelove I fixed the installation issue.

But trying to create the PDF from the .Rmd file above and this occurs:

[mikelove]

(tip: you can copy paste code and enclose it with triple backticks on github, it will render like the following chunk)

this is code

Looks like common-tasks.Rmd was last updated 4 years ago. You can take a look at those lines and see if the functions need updating by cross-referencing the current man pages for plyranges.

[nahid18]

@mikelove Found a cheatsheet template from here CONTRIBUTING.md to work on the plyranges cheatsheet task

[KittJonathan]

@mikelove would overlap figures like these be useful for the doc ? https://bedtools.readthedocs.io/en/latest/content/tools/intersect.html

[mikelove]

@KittJonathan yes i think so! you could compute them within an Rmd using plyranges and make basic plots. I can give more pointers if you wanna start a repo.

[stemangiola]

@KittJonathan @nahid18 please add your authorship details here https://docs.google.com/spreadsheets/d/19XqhN3xAMekCJ-esAolzoWT6fttruSEermjIsrOFcoo/edit?usp=sharing

[mikelove]

just fixed access

[codons-blog]

@mikelove Okay thanks, I'll start working on that ASAP. Thought using this tool https://app.diagrams.net/

[mikelove]

Sure, you can coordinate among the other assignees here to make sure effort isn't duplicated.

[nahid18]

@codons-blog I am working on the cheatsheet