Added child rmd for SCTransform, legacy and quantification based normalization.
Added isvelo parameter. When isvelo is set to false, code chunks specific for velocity analysis are skipped and analysis-sct-quant.Rmd is loaded for normalization of non-velocity datasets
Added run.sct parameter. When run.sct is set to false, the legacy normalization rmd is loaded ( analysis-norm-legacy.Rmd) instead of SCTransform ( analysis-sct-quant.Rmd)
Added evalparameter to code chunks for conditional execution
Optional regression when vars_to_regress_uf/sfparameter is set to ""
isveloparameter. Whenisvelois set tofalse,code chunks specific for velocity analysis are skipped andanalysis-sct-quant.Rmdis loaded for normalization of non-velocity datasetsrun.sctparameter. Whenrun.sctis set tofalse, the legacy normalization rmd is loaded (analysis-norm-legacy.Rmd) instead of SCTransform (analysis-sct-quant.Rmd)evalparameter to code chunks for conditional executionvars_to_regress_uf/sfparameter is set to""