support for fasta files or bam files as input in whippet-quant?

timbitz / Whippet.jl

Lightweight and Fast; RNA-seq quantification at the event-level

MIT License

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support for fasta files or bam files as input in whippet-quant? #105

Open wbvguo opened 4 years ago

wbvguo commented 4 years ago

Hi, may I ask if fasta file can also be used as input besides fastq files? Also, sometimes it takes a lot of computing resources to redo the alignment. May I ask if you plan to expand the whippet-quant that starts from bam files?

Thanks!