This pre-release like the previous, is incompatible with all other versions of Whippet, so you'll need to make new indices to use this version. This version adds:
[x] Compatibility to multiple indices with different Kmer sizes
[x] Alignment parameters as command line flags to whippet-quant.jl, as listed in #3
This pre-release like the previous, is incompatible with all other versions of Whippet, so you'll need to make new indices to use this version. This version adds: