Closed timbitz closed 7 years ago
It seems to me that 2h to build an index is unacceptable. On the sgbioseq branch it takes 9 minutes to build the human index for hg19. Find a way to use BioSequences to build SGSequences without decreasing FMIndex efficiency.
sgbioseq
Closed by #35
It seems to me that 2h to build an index is unacceptable. On the
sgbioseq
branch it takes 9 minutes to build the human index for hg19. Find a way to use BioSequences to build SGSequences without decreasing FMIndex efficiency.