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timbitz / Whippet.jl

Lightweight and Fast; RNA-seq quantification at the event-level
MIT License
105 stars 21 forks source link

Fix deprecations #71

Closed femtocleaner[bot] closed 6 years ago

femtocleaner[bot] commented 6 years ago

I fixed a number of deprecations for you

codecov[bot] commented 6 years ago

Codecov Report

Merging #71 into master will increase coverage by 0.2%. The diff coverage is 65.35%.

Impacted file tree graph

@@            Coverage Diff            @@
##           master      #71     +/-   ##
=========================================
+ Coverage   58.79%   58.99%   +0.2%     
=========================================
  Files          19       19             
  Lines        2378     2370      -8     
=========================================
  Hits         1398     1398             
+ Misses        980      972      -8
Impacted Files Coverage Δ
src/diff.jl 0% <ø> (ø) :arrow_up:
src/edges.jl 73.77% <ø> (+1.19%) :arrow_up:
src/ebi.jl 80% <ø> (ø) :arrow_up:
src/fmindex_patch.jl 100% <ø> (ø) :arrow_up:
src/paired.jl 0% <0%> (ø) :arrow_up:
src/sgkmer.jl 85.71% <100%> (+5.71%) :arrow_up:
src/types.jl 91.67% <100%> (ø) :arrow_up:
src/graph.jl 94.55% <100%> (+0.85%) :arrow_up:
src/io.jl 59.24% <41.18%> (ø) :arrow_up:
src/reads.jl 30.19% <62.5%> (ø) :arrow_up:
... and 3 more

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