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timbitz / Whippet.jl

Lightweight and Fast; RNA-seq quantification at the event-level
MIT License
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Novel events #78

Open KalynaLab opened 5 years ago

KalynaLab commented 5 years ago

Is there a way to (easily) identify the novel events, or is it possibly to add a label to novel events in future updates?

timbitz commented 5 years ago

Hi, there is not currently an easy way to do this, although I agree that this is a necessary label to add to the output, and I plan to do this. I will implement the addition as soon as I have time... the next major version will definitely have this feature. :)

itszhengan commented 4 years ago

Hi, there is not currently an easy way to do this, although I agree that this is a necessary label to add to the output, and I plan to do this. I will implement the addition as soon as I have time... the next major version will definitely have this feature. :)

Hi timbitz if we wanna know novel splicing, could we first identify AS events without merging bam for novel AS detection, then we merge bam to find all the AS events. Finally, the different set of result of each two are novel AS events. Am I right?