Closed paulinefx closed 5 years ago
Hi @paulinefx, yes I have seen this assertion error before-- I created it! :)
You would get this error if you are using two different indexes for alignment... You can only compare .psi.gz
files that were created from the same index. Hope that helps.
Yes that helps a lot. I went too fast in the creation of the index and forgot to merge my bam files. Thank you
Hello,
It is the first time, I am using whippet and julia, so I am discovering a bit and I don't understand this error. For my two samples I created their customed index with their bam file using whippet-index.jl than I have done the quantification withe whippet-quant.jl. Have you ever seen this error ?
Thank you for your help, Pauline
Whippet v0.11 loading and compiling... 30.385936 seconds Sample A: 1441_T_output.psi.gz Sample B: 1441_S_output.psi.gz Now processing files and calculating posterior distributions... ERROR: LoadError: AssertionError: Incorrect events matched!! Stacktrace: [1] #process_psi_files#100(::Int64, ::Int64, ::Float64, ::Int64, ::Function, ::String, ::Array{BufferedStreams.BufferedInputStream,1}, ::Array{BufferedStreams.BufferedInputStream,1}) at /data/home/hfx405/.julia/v0.6/Whippet/src/diff.jl:125 [2] (::Whippet.#kw##process_psi_files)(::Array{Any,1}, ::Whippet.#process_psi_files, ::String, ::Array{BufferedStreams.BufferedInputStream,1}, ::Array{BufferedStreams.BufferedInputStream,1}) at ./:0
[3] macro expansion at /data/home/hfx405/.julia/v0.6/Whippet/src/timer.jl:5 [inlined]
[4] main() at /data/home/hfx405/.julia/v0.6/Whippet/bin/whippet-delta.jl:91
[5] include_from_node1(::String) at ./loading.jl:576
[6] include(::String) at ./sysimg.jl:14
[7] process_options(::Base.JLOptions) at ./client.jl:305
[8] _start() at ./client.jl:371
while loading /data/home/hfx405/.julia/v0.6/Whippet/bin/whippet-delta.jl, in expression starting on line 5