Closed ejosymart closed 3 years ago
Hi Josymar,
On Mon, Oct 11, 2021 at 6:51 AM Josymar Torrejón-Magallanes < @.***> wrote:
1.
Is there a way to show the population abundance (or total biomass) with confidence intervals? 2.
I updated wham, but the html plot of results only shows the heading (diagnostic, results, etc). I tried with different R versions (3.6.3 to 4.1).
Regards.
— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub https://github.com/timjmiller/wham/issues/50, or unsubscribe https://github.com/notifications/unsubscribe-auth/AEIGN7FMI2SLGEFSGS3KYQLUGK6RBANCNFSM5FX53SJA . Triage notifications on the go with GitHub Mobile for iOS https://apps.apple.com/app/apple-store/id1477376905?ct=notification-email&mt=8&pt=524675 or Android https://play.google.com/store/apps/details?id=com.github.android&referrer=utm_campaign%3Dnotification-email%26utm_medium%3Demail%26utm_source%3Dgithub.
-- Timothy J. Miller, PhD (he, him, his) Research Fishery Biologist NOAA, Northeast Fisheries Science Center Woods Hole, MA 508-495-2365
Hi Tim,
There was a warning message when I use plot_wham_output().
Warning messages: 1: In min(x) : ningún argumento finito para min; retornando Inf 2: In max(x) : ningun argumento finito para max; retornando -Inf 3: In min(x) : ningún argumento finito para min; retornando Inf 4: In max(x) : ningun argumento finito para max; retornando -Inf
But, there was no problem with png files, I can see all of them inside the "plots_png" file.
The problem is when I use out.type = 'html'. The code runs (with the warning message previously mentioned), creates an "html" file with all the html subfiles (i.e. diagnostics, input_data, etc) but they were black. Also, my browser opens a new tab, displays the headings (home, diagnostics, etc.), but each sub-tab was blank too.
Thanks.
Hi Josymar,
What OS are you using? Can you please share the output of sessionInfo()
? I'm guessing you are on Windows and this is a duplicate of https://github.com/timjmiller/wham/issues/42. It's hard for me to troubleshoot because I am on Linux and the html output works fine.
@timjmiller perhaps we should just change the default out.type
of plot_wham_output()
to be 'png'
or 'pdf'
?
Could you also provide an example script (with any necessary files) that produces the error? I can check on a windows machine.
On Thu, Oct 14, 2021 at 10:03 AM Brian Stock @.***> wrote:
Hi Josymar,
What OS are you using? Can you please share the output of sessionInfo()? I'm guessing you are on Windows and this is a duplicate of #42 https://github.com/timjmiller/wham/issues/42. It's hard for me to troubleshoot because I am on Linux and the html output works fine.
@timjmiller https://github.com/timjmiller perhaps we should just change the default out.type of plot_wham_output()to be 'png' or 'pdf'?
— You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub https://github.com/timjmiller/wham/issues/50#issuecomment-943389176, or unsubscribe https://github.com/notifications/unsubscribe-auth/AEIGN7DF3AWUPZR73NLT6FTUG3PKPANCNFSM5FX53SJA . Triage notifications on the go with GitHub Mobile for iOS https://apps.apple.com/app/apple-store/id1477376905?ct=notification-email&mt=8&pt=524675 or Android https://play.google.com/store/apps/details?id=com.github.android&referrer=utm_campaign%3Dnotification-email%26utm_medium%3Demail%26utm_source%3Dgithub.
-- Timothy J. Miller, PhD (he, him, his) Research Fishery Biologist NOAA, Northeast Fisheries Science Center Woods Hole, MA 508-495-2365
Josymar, see the recent posts to issue #42. Is Firefox your default browser? If so, try opening wham_output.html in Chrome or internet explorer.
Hi Tim and Brian,
I was using Firefox in Windows. Now, the html opens for me using Chrome.
Thanks!
1) Is there a way to show the population abundance (or total biomass) with confidence intervals?
2) I updated wham, but the html plot of results only shows the heading (diagnostic, results, etc). I tried with different R versions (3.6.3 to 4.1).
Regards.