Which mapping file for NR database

timkahlke / BASTA

Basic Sequence Taxonomy Annotator

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Closed zhuxiaoyu123 closed 2 years ago

zhuxiaoyu123 commented 2 years ago

Hi,

If i use NR database, which mapping file should i download?

Thanks

timkahlke commented 2 years ago

Hi,

for nucleotide should be "gb".

Cheers

zhuxiaoyu123 commented 2 years ago

Hi,

NR is protein database, i think prot may be the right one.

Cheers

timkahlke commented 2 years ago

Sorry, I somehow read "nt" instead of "nr". Yes, prot is the one you want.

zhuxiaoyu123 commented 2 years ago

OK. Appreciate that.