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timmassingham / simNGS

Simulate short-reads datasets using probabilistic models
http://www.ebi.ac.uk/goldman-srv/simNGS/
GNU General Public License v3.0
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example runfiles #3

Closed thirtyeggs closed 11 years ago

thirtyeggs commented 11 years ago

Hi, Can I ask the difference among the example runfiiles under http://www.ebi.ac.uk/goldman-srv/simNGS/runfiles5? The HiSeq runfiles follow the rule sx.runfile and the 151 cycle GAII runfiles follow the rule s.runfile. Can you tell me the meaning of each NumX? Thank you for your help in advance.

Yun

timmassingham commented 11 years ago

They are where the data was trained from. For the GAII runs, the numbers and lane then tile. For the HiSeq runs, I only had access to decimated data; the first number refers to the channel, the 4x refers to tiles 40 to 49.

On 19 July 2013 00:56, thirtyeggs notifications@github.com wrote:

Hi, Can I ask the difference among the example runfiiles under http://www.ebi.ac.uk/goldman-srv/simNGS/runfiles5? The HiSeq runfiles follow the rule sx.runfile and the 151 cycle GAII runfiles follow the rule s.runfile. Can you tell me the meaning of each NumX? Thank you for your help in advance.

Yun

— Reply to this email directly or view it on GitHubhttps://github.com/timmassingham/simNGS/issues/3 .

thirtyeggs commented 11 years ago

Thank you for your clarification!