Configurable fragment +/- shift

timoast / sinto

Tools for single-cell data processing

https://timoast.github.io/sinto/

MIT License

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Closed suragnair closed 2 years ago

suragnair commented 2 years ago

The shift is currently hardcoded as +4/-5. Can this be made configurable? Also it seems +4/-4 is the right shift to apply.

timoast commented 2 years ago

Hi @suragnair, I've now added this to the develop branch (--shift_plus and --shift_minus)

suragnair commented 2 years ago

Thanks!

austintwang commented 2 years ago

What is the timeline for releasing the feature to master? Would be great to have it in conda

timoast commented 2 years ago

This should be done now, might take some time for the conda release to roll out