Increase the column index of the mtx matrix. In order to do this, we need to keep a list of number of cells in each file. I store this information inside the bag_of_variables$n_cells_in_files. I also modified some lower level helper function to compute and store the number of cells in each file.
Add a new argument in "n_cells_in_files" inside arguments_enum() in covariate_computation_functs.R.
Modify the get_mtx_metadata() function to compute and store the number of cells in each file in high_level_initialize_helper.R.
Store the n_cells_in_files in bag_of_variables in create_ondisc_matrix_from_mtx() in high_level_initialize.R.
Fix the bugs in run_core_algo_step_2_mtxfilelist() in low_level_initialize.R
increase the column index for each file we read, make sure it's integer type
increase pos for each iteration
Add test cases in test-multiple_input_files.R to compare with the ground truth matrix and also check the covariates
Increase the column index of the mtx matrix. In order to do this, we need to keep a list of number of cells in each file. I store this information inside the
bag_of_variables$n_cells_in_files
. I also modified some lower level helper function to compute and store the number of cells in each file.arguments_enum()
in covariate_computation_functs.R.get_mtx_metadata()
function to compute and store the number of cells in each file in high_level_initialize_helper.R.n_cells_in_files
inbag_of_variables
increate_ondisc_matrix_from_mtx()
in high_level_initialize.R.Fix the bugs in
run_core_algo_step_2_mtxfilelist()
in low_level_initialize.RAdd test cases in test-multiple_input_files.R to compare with the ground truth matrix and also check the covariates