timothydmorton / isochrones

Pythonic stellar model grid access; easy MCMC fitting of stellar properties
http://isochrones.readthedocs.org
MIT License
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run interrupted in nosetests #167

Open redeaglekr opened 2 years ago

redeaglekr commented 2 years ago

Hi,

I had to install isochrones as inorder to use a package called "SPECIES" @msotov(https://github.com/msotov/SPECIES). For that, I followed the instructions (https://isochrones.readthedocs.io/en/latest/install.html#Conda-environment-and-testing) and ran "nosetests isochrones".

I would like to know whether this is the expected output.

The output :

/home/redeagle/anaconda3/envs/isochrones/lib/python3.9/site-packages/isochrones/tests/test_fits.py:6: FutureWarning: pandas.util.testing is deprecated. Use the functions in the public API at pandas.testing instead. from pandas.util.testing import assert_frame_equal /home/redeagle/anaconda3/envs/isochrones/lib/python3.9/site-packages/pandas/core/arraylike.py:364: RuntimeWarning: divide by zero encountered in log10 result = getattr(ufunc, method)(*inputs, **kwargs) /home/redeagle/anaconda3/envs/isochrones/lib/python3.9/site-packages/pandas/core/indexing.py:1773: SettingWithCopyWarning: A value is trying to be set on a copy of a slice from a DataFrame. Try using .loc[row_indexer,col_indexer] = value instead

See the caveats in the documentation: https://pandas.pydata.org/pandas-docs/stable/user_guide/indexing.html#returning-a-view-versus-a-copy self._setitem_single_column(ilocs[0], value, pi) /home/redeagle/anaconda3/envs/isochrones/lib/python3.9/site-packages/tables/attributeset.py:464: NaturalNameWarning: object name is not a valid Python identifier: 'axis1name[Fe/H]'; it does not match the pattern ``^[a-zA-Z][a-zA-Z0-9_]$; you will not be able to use natural naming to access this object; usinggetattr()`` will still work, though check_attribute_name(name) interpolating missing values in evolution tracks (feh=-4.0)': 100%|█| 196/196 [0 interpolating missing values in evolution tracks (feh=-3.5)': 100%|█| 196/196 [0 interpolating missing values in evolution tracks (feh=-3.0)': 100%|█| 196/196 [0 interpolating missing values in evolution tracks (feh=-2.5)': 100%|█| 196/196 [0 interpolating missing values in evolution tracks (feh=-2.0)': 100%|█| 196/196 [0 interpolating missing values in evolution tracks (feh=-1.75)': 100%|█| 196/196 [ interpolating missing values in evolution tracks (feh=-1.5)': 100%|█| 196/196 [0 interpolating missing values in evolution tracks (feh=-1.25)': 100%|█| 196/196 [ interpolating missing values in evolution tracks (feh=-1.0)': 100%|█| 196/196 [0 interpolating missing values in evolution tracks (feh=-0.75)': 100%|█| 196/196 [ interpolating missing values in evolution tracks (feh=-0.5)': 100%|█| 196/196 [0 interpolating missing values in evolution tracks (feh=-0.25)': 100%|█| 196/196 [ interpolating missing values in evolution tracks (feh=0.0)': 100%|█| 196/196 [00 interpolating missing values in evolution tracks (feh=0.25)': 100%|█| 196/196 [0 interpolating missing values in evolution tracks (feh=0.5)': 100%|█| 196/196 [00 /home/redeagle/anaconda3/envs/isochrones/lib/python3.9/site-packages/pandas/core/arraylike.py:364: RuntimeWarning: divide by zero encountered in log10 result = getattr(ufunc, method)(inputs, **kwargs) Killed

It would be great if you could help!