Snakemake 7.29.0 added the option to use a workflow profile that overrides local profiles. By default, this is profiles/default. We should use this mechanism to allow for local profiles.
As the workflow profile default works for us out of the box, we only need to update to 7.29.0. We can remove the env variable in the default environment.
Snakemake 7.29.0 added the option to use a workflow profile that overrides local profiles. By default, this is
profiles/default
. We should use this mechanism to allow for local profiles.As the workflow profile default works for us out of the box, we only need to update to 7.29.0. We can remove the env variable in the default environment.