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titanous / homebrew-gnuradio

GNU Radio Formulae for Homebrew (unmaintained)
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Struggling to install, not sure where to go! #15

Open pwarren opened 12 years ago

pwarren commented 12 years ago

Probably a PEBKAC, but, I'm going through your instructions, and keep failing on the scipy installation, it appears to not be able to detect the numpy installation.

Hollis:~ pwarren$ /usr/local/share/python/pip install https://github.com/scipy/scipy/tarball/v0.11.0rc2
Downloading/unpacking https://github.com/scipy/scipy/tarball/v0.11.0rc2
  Downloading v0.11.0rc2 (9.9MB): 9.9MB downloaded
  Running setup.py egg_info for package from https://github.com/scipy/scipy/tarball/v0.11.0rc2
    blas_opt_info:
      FOUND:
        extra_link_args = ['-Wl,-framework', '-Wl,Accelerate']
        define_macros = [('NO_ATLAS_INFO', 3)]
        extra_compile_args = ['-msse3', '-I/System/Library/Frameworks/vecLib.framework/Headers']

    lapack_opt_info:
      FOUND:
        extra_link_args = ['-Wl,-framework', '-Wl,Accelerate']
        define_macros = [('NO_ATLAS_INFO', 3)]
        extra_compile_args = ['-msse3']

    umfpack_info:
      libraries umfpack not found in /usr/local/Cellar/python/2.7.3/Frameworks/Python.framework/Versions/2.7/lib
    amd_info:
      libraries amd not found in /usr/local/Cellar/python/2.7.3/Frameworks/Python.framework/Versions/2.7/lib
      FOUND:
        libraries = ['amd']
        library_dirs = ['/usr/local/lib']
        swig_opts = ['-I/usr/local/include']
        define_macros = [('SCIPY_AMD_H', None)]
        include_dirs = ['/usr/local/include']

      FOUND:
        libraries = ['umfpack', 'amd']
        library_dirs = ['/usr/local/lib']
        swig_opts = ['-I/usr/local/include', '-I/usr/local/include']
        define_macros = [('SCIPY_UMFPACK_H', None), ('SCIPY_AMD_H', None)]
        include_dirs = ['/usr/local/include']

    Traceback (most recent call last):
      File "<string>", line 16, in <module>
      File "/var/folders/rj/7k9g5zdd705cjxmc1f2hl0j00000gn/T/pip-CUD6uJ-build/setup.py", line 208, in <module>
        setup_package()
      File "/var/folders/rj/7k9g5zdd705cjxmc1f2hl0j00000gn/T/pip-CUD6uJ-build/setup.py", line 199, in setup_package
        configuration=configuration )
      File "/usr/local/lib/python2.7/site-packages/numpy/distutils/core.py", line 152, in setup
        config = configuration()
      File "/var/folders/rj/7k9g5zdd705cjxmc1f2hl0j00000gn/T/pip-CUD6uJ-build/setup.py", line 136, in configuration
        config.add_subpackage('scipy')
      File "/usr/local/lib/python2.7/site-packages/numpy/distutils/misc_util.py", line 1002, in add_subpackage
        caller_level = 2)
      File "/usr/local/lib/python2.7/site-packages/numpy/distutils/misc_util.py", line 971, in get_subpackage
        caller_level = caller_level + 1)
      File "/usr/local/lib/python2.7/site-packages/numpy/distutils/misc_util.py", line 908, in _get_configuration_from_setup_py
        config = setup_module.configuration(*args)
      File "scipy/setup.py", line 19, in configuration
        config.add_subpackage('special')
      File "/usr/local/lib/python2.7/site-packages/numpy/distutils/misc_util.py", line 1002, in add_subpackage
        caller_level = 2)
      File "/usr/local/lib/python2.7/site-packages/numpy/distutils/misc_util.py", line 971, in get_subpackage
        caller_level = caller_level + 1)
      File "/usr/local/lib/python2.7/site-packages/numpy/distutils/misc_util.py", line 908, in _get_configuration_from_setup_py
        config = setup_module.configuration(*args)
      File "/private/var/folders/rj/7k9g5zdd705cjxmc1f2hl0j00000gn/T/pip-CUD6uJ-build/scipy/special/setup.py", line 54, in configuration
        extra_info=get_info("npymath")
      File "/usr/local/lib/python2.7/site-packages/numpy/distutils/misc_util.py", line 2220, in get_info
        pkg_info = get_pkg_info(pkgname, dirs)
      File "/usr/local/lib/python2.7/site-packages/numpy/distutils/misc_util.py", line 2172, in get_pkg_info
        return read_config(pkgname, dirs)
      File "/usr/local/lib/python2.7/site-packages/numpy/distutils/npy_pkg_config.py", line 390, in read_config
        v = _read_config_imp(pkg_to_filename(pkgname), dirs)
      File "/usr/local/lib/python2.7/site-packages/numpy/distutils/npy_pkg_config.py", line 326, in _read_config_imp
        meta, vars, sections, reqs = _read_config(filenames)
      File "/usr/local/lib/python2.7/site-packages/numpy/distutils/npy_pkg_config.py", line 309, in _read_config
        meta, vars, sections, reqs = parse_config(f, dirs)
      File "/usr/local/lib/python2.7/site-packages/numpy/distutils/npy_pkg_config.py", line 281, in parse_config
        raise PkgNotFound("Could not find file(s) %s" % str(filenames))
    numpy.distutils.npy_pkg_config.PkgNotFound: Could not find file(s) ['/usr/local/lib/python2.7/site-packages/numpy/core/lib/npy-pkg-config/npymath.ini']
    Complete output from command python setup.py egg_info:
    blas_opt_info:

  FOUND:

    extra_link_args = ['-Wl,-framework', '-Wl,Accelerate']

    define_macros = [('NO_ATLAS_INFO', 3)]

    extra_compile_args = ['-msse3', '-I/System/Library/Frameworks/vecLib.framework/Headers']

lapack_opt_info:

  FOUND:

    extra_link_args = ['-Wl,-framework', '-Wl,Accelerate']

    define_macros = [('NO_ATLAS_INFO', 3)]

    extra_compile_args = ['-msse3']

umfpack_info:

  libraries umfpack not found in /usr/local/Cellar/python/2.7.3/Frameworks/Python.framework/Versions/2.7/lib

amd_info:

  libraries amd not found in /usr/local/Cellar/python/2.7.3/Frameworks/Python.framework/Versions/2.7/lib

  FOUND:

    libraries = ['amd']

    library_dirs = ['/usr/local/lib']

    swig_opts = ['-I/usr/local/include']

    define_macros = [('SCIPY_AMD_H', None)]

    include_dirs = ['/usr/local/include']

  FOUND:

    libraries = ['umfpack', 'amd']

    library_dirs = ['/usr/local/lib']

    swig_opts = ['-I/usr/local/include', '-I/usr/local/include']

    define_macros = [('SCIPY_UMFPACK_H', None), ('SCIPY_AMD_H', None)]

    include_dirs = ['/usr/local/include']

Traceback (most recent call last):

  File "<string>", line 16, in <module>

  File "/var/folders/rj/7k9g5zdd705cjxmc1f2hl0j00000gn/T/pip-CUD6uJ-build/setup.py", line 208, in <module>

    setup_package()

  File "/var/folders/rj/7k9g5zdd705cjxmc1f2hl0j00000gn/T/pip-CUD6uJ-build/setup.py", line 199, in setup_package

    configuration=configuration )

  File "/usr/local/lib/python2.7/site-packages/numpy/distutils/core.py", line 152, in setup

    config = configuration()

  File "/var/folders/rj/7k9g5zdd705cjxmc1f2hl0j00000gn/T/pip-CUD6uJ-build/setup.py", line 136, in configuration

    config.add_subpackage('scipy')

  File "/usr/local/lib/python2.7/site-packages/numpy/distutils/misc_util.py", line 1002, in add_subpackage

    caller_level = 2)

  File "/usr/local/lib/python2.7/site-packages/numpy/distutils/misc_util.py", line 971, in get_subpackage

    caller_level = caller_level + 1)

  File "/usr/local/lib/python2.7/site-packages/numpy/distutils/misc_util.py", line 908, in _get_configuration_from_setup_py

    config = setup_module.configuration(*args)

  File "scipy/setup.py", line 19, in configuration

    config.add_subpackage('special')

  File "/usr/local/lib/python2.7/site-packages/numpy/distutils/misc_util.py", line 1002, in add_subpackage

    caller_level = 2)

  File "/usr/local/lib/python2.7/site-packages/numpy/distutils/misc_util.py", line 971, in get_subpackage

    caller_level = caller_level + 1)

  File "/usr/local/lib/python2.7/site-packages/numpy/distutils/misc_util.py", line 908, in _get_configuration_from_setup_py

    config = setup_module.configuration(*args)

  File "/private/var/folders/rj/7k9g5zdd705cjxmc1f2hl0j00000gn/T/pip-CUD6uJ-build/scipy/special/setup.py", line 54, in configuration

    extra_info=get_info("npymath")

  File "/usr/local/lib/python2.7/site-packages/numpy/distutils/misc_util.py", line 2220, in get_info

    pkg_info = get_pkg_info(pkgname, dirs)

  File "/usr/local/lib/python2.7/site-packages/numpy/distutils/misc_util.py", line 2172, in get_pkg_info

    return read_config(pkgname, dirs)

  File "/usr/local/lib/python2.7/site-packages/numpy/distutils/npy_pkg_config.py", line 390, in read_config

    v = _read_config_imp(pkg_to_filename(pkgname), dirs)

  File "/usr/local/lib/python2.7/site-packages/numpy/distutils/npy_pkg_config.py", line 326, in _read_config_imp

    meta, vars, sections, reqs = _read_config(filenames)

  File "/usr/local/lib/python2.7/site-packages/numpy/distutils/npy_pkg_config.py", line 309, in _read_config

    meta, vars, sections, reqs = parse_config(f, dirs)

  File "/usr/local/lib/python2.7/site-packages/numpy/distutils/npy_pkg_config.py", line 281, in parse_config

    raise PkgNotFound("Could not find file(s) %s" % str(filenames))

numpy.distutils.npy_pkg_config.PkgNotFound: Could not find file(s) ['/usr/local/lib/python2.7/site-packages/numpy/core/lib/npy-pkg-config/npymath.ini']

----------------------------------------
Command python setup.py egg_info failed with error code 1 in /var/folders/rj/7k9g5zdd705cjxmc1f2hl0j00000gn/T/pip-CUD6uJ-build
Storing complete log in /Users/pwarren/.pip/pip.log

the /usr/local/lib/python2.7/site-packages/numpy/core/lib/npy-pkg-config/npymath.ini'

Does not seem to exist, but there are a bunch of python files in /usr/local/lib/python2.7/site-packages/numpy/core/

I'm using a brand new macbook air 13", with OS X 10.8.1 and xcode 4.4.1, I did the homebrew install, and hombrew doctor, and homebrew install wget worked pretty well ;)

Just a bit lost with all this, thanks for any help!

pwarren commented 12 years ago 
Hollis:~ pwarren$ echo $PATH
/usr/local/bin:/usr/local/share/python:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/bin:/opt/X11/bin
Hollis:~ pwarren$ echo $PYTHONPATH
/usr/local/lib/python2.7/site-packages/:/usr/local/Cellar/python/2.7.3/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/:
Hollis:~ pwarren$

Some more info

dweeks commented 12 years ago

I too ran into the missing

npymath.ini

file problem on a 10.7.4 machine. The solution for me was to install numpy from source.

pwarren commented 12 years ago

Yep, downloading from sourceforge, 

python setup.py build
python setup.py install

and we're all good.

pwarren commented 12 years ago

Well, not quite all good.

Now it's complaining: No available formula for gnuradio

pc-00201:~ pwarren$ brew install gnuradio
Error: No available formula for gnuradio 
pc-00201:~ pwarren$ brew tap titanous/homebrew-gnuradio
Error: Already tapped!

sad face!

dweeks commented 12 years ago

That is strange - I did not run into that problem.

How about trying:

brew uninstall gnuradio brew untap titanous/homebrew-gnuradio brew tap titanous/homebrew-gnuradio brew tap --repair brew install gnuradio

pwarren commented 12 years ago

the brew untap then retap seemed to do the trick.

THanks for the help dweeks. This has been the first time I've tried homebrew, think I'm starting to like it :)

lokkju commented 11 years ago

per https://github.com/pypa/pip/issues/707, try this:

brew tap samueljohn/python
brew install numpy
brew install scipy