All of PubMed XML was updated to follow the MEDLINE XML format.

titipata / pubmed_parser

:clipboard: A Python Parser for PubMed Open-Access XML Subset and MEDLINE XML Dataset

http://titipata.github.io/pubmed_parser/

MIT License

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All of PubMed XML was updated to follow the MEDLINE XML format. #109

Open MattYoon opened 2 years ago

MattYoon commented 2 years ago

Describe the bug It seems like now every file from the PubMed XML follows the MEDLINE XML format. Therefore, running pp.parse_pubmed_xml() on any file will always result to the issue described in #95. I was able to overcome this issue by using pp.parse_medline_xml() instead.

I think some refactoring and document update should be done.