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tix209 / TSOAX

Extraction and tracking of dynamic biopolymer networks.
https://www.lehigh.edu/~div206/tsoax/
GNU Lesser General Public License v3.0
3 stars 3 forks source link

TSOAX does not build with the latest VTK-9.0.3 #1

Open karthik-vm opened 2 years ago

karthik-vm commented 2 years ago

Hi,

When I try to compile TSOAX with the latest VTK-9.0.3 on a singularity container running ubuntu 18.04, it complains that QVTKOpenGLWidget.h header file is missing. It looks like this header file is deprecated in VTK-9.0.3 and it is now a wrapper for QVTKOpenGLStereoWidget.h. I tried to compile TSOAX with earlier versions of VTK but encounter other errors. Any help in getting the code compiled with VTK-9.0.3 will be highly appreciated.

Error log:

Singularity> make -j 10 [ 4%] Qt Wrapped File [ 4%] Qt Wrapped File [ 6%] Qt Wrapped File [ 12%] Qt Wrapped File [ 12%] Qt Wrapped File [ 12%] Qt Wrapped File [ 14%] Automatic MOC, UIC and RCC for target TSOAX [ 14%] Built target TSOAX_autogen Scanning dependencies of target TSOAX [ 16%] Building CXX object src/CMakeFiles/TSOAX.dir/actor_color.cc.o [ 18%] Building CXX object src/CMakeFiles/TSOAX.dir/analysis_options_dialog.cc.o [ 20%] Building CXX object src/CMakeFiles/TSOAX.dir/gradient_calculator.cc.o [ 22%] Building CXX object src/CMakeFiles/TSOAX.dir/image.cc.o [ 24%] Building CXX object src/CMakeFiles/TSOAX.dir/image_plane.cc.o [ 26%] Building CXX object src/CMakeFiles/TSOAX.dir/image_reader.cc.o [ 28%] Building CXX object src/CMakeFiles/TSOAX.dir/junctions.cc.o [ 30%] Building CXX object src/CMakeFiles/TSOAX.dir/junction_actor.cc.o [ 32%] Building CXX object src/CMakeFiles/TSOAX.dir/image_resampler.cc.o [ 34%] Building CXX object src/CMakeFiles/TSOAX.dir/interpolator.cc.o [ 36%] Building CXX object src/CMakeFiles/TSOAX.dir/main_window.cc.o /home/kvadamba/TSOAX/src/main_window.cc:35:10: fatal error: QVTKOpenGLWidget.h: No such file or directory

include "QVTKOpenGLWidget.h"

      ^~~~~~~~~~~~~~~~~~~~

compilation terminated. src/CMakeFiles/TSOAX.dir/build.make:332: recipe for target 'src/CMakeFiles/TSOAX.dir/main_window.cc.o' failed make[2]: [src/CMakeFiles/TSOAX.dir/main_window.cc.o] Error 1 make[2]: Waiting for unfinished jobs.... CMakeFiles/Makefile2:86: recipe for target 'src/CMakeFiles/TSOAX.dir/all' failed make[1]: [src/CMakeFiles/TSOAX.dir/all] Error 2 Makefile:83: recipe for target 'all' failed make: [all] Error 2

vavylonis commented 2 years ago

Hello and sorry for the late response. You could try setting these flags to ON when compiling VTK: Module_vtkGUISupportQt, Module_vtk_GUISupportQtOpenGL, VTK_Group_Qt I haven't tried VTK 9.0.3 but 8.1.1 should work.