tjhladish / AbcSmc

Sequential Monte Carlo Approximate Bayesian Computation with Partial Least Squares parameter estimator
GNU General Public License v3.0
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run_sql not a valid make target, and a bare `make` fails with errors #52

Open tjhladish opened 1 year ago

tjhladish commented 1 year ago

Quick start documentation instructs users to run make run_sql; make run_sql; make run_sql. This used to work, but run_sql is no longer a valid make target. Running make in the examples directory with the default target produces the following:

cmake -S . -B demo
-- The C compiler identification is GNU 11.4.0
-- The CXX compiler identification is GNU 11.4.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
CMake Warning (dev) in CMakeLists.txt:
  No cmake_minimum_required command is present.  A line of code such as

    cmake_minimum_required(VERSION 3.22)

  should be added at the top of the file.  The version specified may be lower
  if you wish to support older CMake versions for this project.  For more
  information run "cmake --help-policy CMP0000".
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Configuring done
CMake Warning (dev) at CMakeLists.txt:9 (add_library):
  Policy CMP0028 is not set: Double colon in target name means ALIAS or
  IMPORTED target.  Run "cmake --help-policy CMP0028" for policy details.
  Use the cmake_policy command to set the policy and suppress this warning.

  Target "dice" links to target "GSL::gsl" but the target was not found.
  Perhaps a find_package() call is missing for an IMPORTED target, or an
  ALIAS target is missing?
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at CMakeLists.txt:9 (add_library):
  Policy CMP0028 is not set: Double colon in target name means ALIAS or
  IMPORTED target.  Run "cmake --help-policy CMP0028" for policy details.
  Use the cmake_policy command to set the policy and suppress this warning.

  Target "dice" links to target "GSL::gslcblas" but the target was not found.
  Perhaps a find_package() call is missing for an IMPORTED target, or an
  ALIAS target is missing?
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at CMakeLists.txt:12 (add_executable):
  Policy CMP0028 is not set: Double colon in target name means ALIAS or
  IMPORTED target.  Run "cmake --help-policy CMP0028" for policy details.
  Use the cmake_policy command to set the policy and suppress this warning.

  Target "dice_game" links to target "GSL::gsl" but the target was not found.
  Perhaps a find_package() call is missing for an IMPORTED target, or an
  ALIAS target is missing?
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at CMakeLists.txt:12 (add_executable):
  Policy CMP0028 is not set: Double colon in target name means ALIAS or
  IMPORTED target.  Run "cmake --help-policy CMP0028" for policy details.
  Use the cmake_policy command to set the policy and suppress this warning.

  Target "dice_game" links to target "GSL::gslcblas" but the target was not
  found.  Perhaps a find_package() call is missing for an IMPORTED target, or
  an ALIAS target is missing?
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at CMakeLists.txt:37 (add_executable):
  Policy CMP0028 is not set: Double colon in target name means ALIAS or
  IMPORTED target.  Run "cmake --help-policy CMP0028" for policy details.
  Use the cmake_policy command to set the policy and suppress this warning.

  Target "shared" links to target "GSL::gsl" but the target was not found.
  Perhaps a find_package() call is missing for an IMPORTED target, or an
  ALIAS target is missing?
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at CMakeLists.txt:37 (add_executable):
  Policy CMP0028 is not set: Double colon in target name means ALIAS or
  IMPORTED target.  Run "cmake --help-policy CMP0028" for policy details.
  Use the cmake_policy command to set the policy and suppress this warning.

  Target "shared" links to target "GSL::gslcblas" but the target was not
  found.  Perhaps a find_package() call is missing for an IMPORTED target, or
  an ALIAS target is missing?
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at CMakeLists.txt:37 (add_executable):
  Policy CMP0028 is not set: Double colon in target name means ALIAS or
  IMPORTED target.  Run "cmake --help-policy CMP0028" for policy details.
  Use the cmake_policy command to set the policy and suppress this warning.

  Target "pseudo" links to target "GSL::gsl" but the target was not found.
  Perhaps a find_package() call is missing for an IMPORTED target, or an
  ALIAS target is missing?
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at CMakeLists.txt:37 (add_executable):
  Policy CMP0028 is not set: Double colon in target name means ALIAS or
  IMPORTED target.  Run "cmake --help-policy CMP0028" for policy details.
  Use the cmake_policy command to set the policy and suppress this warning.

  Target "pseudo" links to target "GSL::gslcblas" but the target was not
  found.  Perhaps a find_package() call is missing for an IMPORTED target, or
  an ALIAS target is missing?
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at CMakeLists.txt:37 (add_executable):
  Policy CMP0003 should be set before this line.  Add code such as

    if(COMMAND cmake_policy)
      cmake_policy(SET CMP0003 NEW)
    endif(COMMAND cmake_policy)

  as early as possible but after the most recent call to
  cmake_minimum_required or cmake_policy(VERSION).  This warning appears
  because target "shared" links to some libraries for which the linker must
  search:

    abc, GSL::gsl, GSL::gslcblas

  and other libraries with known full path:

    /home/tjhladish/work/AbcSmc/examples/demo/libdice.so

  CMake is adding directories in the second list to the linker search path in
  case they are needed to find libraries from the first list (for backwards
  compatibility with CMake 2.4).  Set policy CMP0003 to OLD or NEW to enable
  or disable this behavior explicitly.  Run "cmake --help-policy CMP0003" for
  more information.
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Generating done
-- Build files have been written to: /home/tjhladish/work/AbcSmc/examples/demo
cd demo && make direct
make[1]: Entering directory '/home/tjhladish/work/AbcSmc/examples/demo'
make[1]: *** No rule to make target 'direct'.  Stop.
make: *** [Makefile:36: demo/direct] Error 2