tjhwangxiong / TCGAplot

A number of functions were generated to perform pan-cancer DEG analysis, correlation analysis between gene expression and TMB, MSI, TIME, and promoter methylation. Methods for visualization were provided in order to easily perform integrative pan-cancer multi-omics analysis.
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Error in get_all_tpm() : could not find function "get_all_tpm" #4

Closed Yanyouior closed 9 months ago

Yanyouior commented 10 months ago

I tried to obtain the built-in data, but RStudio could not find function "get_all_xxxx". However, if I use the "get_xxxx ('xxxx')" function, I can obtain the relevant data. In addition, the help of the 'TCGAplot' version 5.0.0 package does not mention the 'get_all_xxxx()' function.

tjhwangxiong commented 10 months ago

We will release v7.0.0 ASAP

use v7.0.0


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--------------原始邮件-------------- 发件人:"Pan Zhang @.>; 发送时间:2024年1月5日(星期五) 下午3:03 收件人:"tjhwangxiong/TCGAplot" @.>; 抄送:"Subscribed @.***>; 主题:[tjhwangxiong/TCGAplot] Error in get_all_tpm() : could not find function "get_all_tpm" (Issue #4)

I tried to obtain the built-in data, but RStudio could not find function "get_all_xxxx". However, if I use the "get_xxxx ('xxxx')" function, I can obtain the relevant data. In addition, the help of the 'TCGAplot' version 5.0.0 package does not mention the 'get_all_xxxx()' function.

— Reply to this email directly, view it on GitHub, or unsubscribe. You are receiving this because you are subscribed to this thread.Message ID: @.***>

tjhwangxiong commented 10 months ago

To install this package for Windows system, download TCGAplot R package at https://github.com/tjhwangxiong/TCGAplot/releases/download/v7.0.0/TCGAplot_7.0.0.zip

or at Baidu Pan https://pan.baidu.com/s/1_zt-te0GmU_vbey3_Hx16Q?pwd=nmsy

and install locally.

To install this package for Mac system, download TCGAplot R package at google drive https://drive.google.com/file/d/1y79k-GQKz2b3Uv28eWDVYsCFPKVjm2WC/view?usp=sharing

or at Baidu Pan https://pan.baidu.com/s/1a7-Z5N8C7YLSjTogMeXE_A?pwd=agf7

and install locally.